This is an archive copy of the IUCr web site dating from 2008. For current content please visit
https://www.iucr.org.
Category struct_ref_seq
| Top | Dictionary | Category Groups | Categories | Items | Data |
Category Description
Data items in the STRUCT_REF_SEQ category provide a mechanism
for indicating and annotating a region (or regions) of alignment
between the sequence of an entity or biological unit described
in the data block and the sequence in the referenced database
entry.
Category Examples
Example 1:
Example 1 - based on the sequence alignment of CHER from M. Xantus
(36 to 288) and CHER from S. Tyrhimurium (18 to 276).
_struct_ref_seq.align_id alg1
_struct_ref_seq.ref_id seqdb1
_struct_ref_seq.seq_align_beg 36
_struct_ref_seq.seq_align_end 288
_struct_ref_seq.db_align_beg 18
_struct_ref_seq.db_align_end 276
_struct_ref_seq.details
;
The alignment contains 3 gaps larger than 2 residues
;
Key Category Items
Items in Category struct_ref_seq
| Top | Dictionary | Category Groups | Categories | Items | Data |
This HTML dictionary was created using the
CIFLIB C Language Application Program Interface
at the
Resource Collaboratory for Structural Bioinformatics
Rutgers University, Department of Chemistry
New Brunswick, New Jersey
help@rcsb.rutgers.edu